You will find Labkit in the main menu under Plugins > Labkit. Fiji bundles together many popular and useful ImageJ plugins for image analysis into one installation, and automatically manages their dependencies and updating. These images, and more, are also available as a 8.2MB zip archive. Finally, manual tools for ground-truth annotation are available. 31 downloadable sample images and stacks are available in ImageJs File>Open Samples submenu. Furthermore, memory efficient and fast random forest based pixel classification based on the Waikato Environment for Knowledge Analysis (WEKA) is implemented, optionally exploiting the power of graphics processing units (GPUs) to gain additional performance and can even be used on high performance computing clusters (HPC) for distributed processing of big image data. This efficiency is achieved by using Imglib2 and BigDataViewer as the foundation of our software. The whole process should not take more than a couple of minutes. All the files should extract in a new folder 'dropanalysis'. Extract dropanalysis.zip in the 'plugins' folder of ImageJ. Labkit is specifically designed to work efficiently on big image data and users of consumer laptops can conveniently work with multiple terabytes large image data. and download the plugin dropanalysis.zip. It offers easy to use manual and automated image segmentation routines that can be rapidly applied to single- and multi-channel images as well as timelapse movies in 2D or 3D. Labkit is a user-friendly Fiji plugin for the segmentation of microscopy image data.
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |